Fastqc时遇到【Exception in thread “Thread

Fastqc时遇到【Exception in thread “Thread

1、今天在Fastqc，命令行如下，居然出现了问题

fastqc -o "$fastqpath" "$filepath"/"$line".R1.adapter_val_ "$filepath"/"$line".R2.adapter_val_

2、具体问题

XC-2_L2_376376 is staring fatsqc
Started analysis of XC-2_L2_376376.R1.adapter_val_
Approx 5% complete for XC-2_L2_376376.R1.adapter_val_
Approx 10% complete for XC-2_L2_376376.R1.adapter_val_
Approx 15% complete for XC-2_L2_376376.R1.adapter_val_
Approx 20% complete for XC-2_L2_376376.R1.adapter_val_
Approx 25% complete for XC-2_L2_376376.R1.adapter_val_
Approx 30% complete for XC-2_L2_376376.R1.adapter_val_
Approx 35% complete for XC-2_L2_376376.R1.adapter_val_
Approx 40% complete for XC-2_L2_376376.R1.adapter_val_
Approx 45% complete for XC-2_L2_376376.R1.adapter_val_
Approx 50% complete for XC-2_L2_376376.R1.adapter_val_
Approx 55% complete for XC-2_L2_376376.R1.adapter_val_
Approx 60% complete for XC-2_L2_376376.R1.adapter_val_
Approx 65% complete for XC-2_L2_376376.R1.adapter_val_
Approx 70% complete for XC-2_L2_376376.R1.adapter_val_
Approx 75% complete for XC-2_L2_376376.R1.adapter_val_
Approx 80% complete for XC-2_L2_376376.R1.adapter_val_
Approx 85% complete for XC-2_L2_376376.R1.adapter_val_
Approx 90% complete for XC-2_L2_376376.R1.adapter_val_
Exception in thread "Thread-1" java.lang.OutOfMemoryError: GC overhead limit exceededat java.pyOfRange(Arrays.java:3664)Exception: java.lang.OutOfMemoryError thrown from the UncaughtExceptionHandler in thread "Thread-1"

3、直接加线程，搞定

fastqc -o "$fastqpath" -t 4 "$filepath"/"$line".R1.adapter_val_ "$filepath"/"$line".R2.adapter_val_